How to combine forest plots in package metafor?
假设下面的代码(在 http://www.metafor-project.org/doku.php/plots:forest_plot_with_subgroups 中给出)
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 | library(metafor) ### decrease margins so the full space is used par(mar=c(4,4,1,2)) ### fit random-effects model (use slab argument to define study labels) res <- rma(ai=tpos, bi=tneg, ci=cpos, di=cneg, data=dat.bcg, measure="RR", slab=paste(author, year, sep=","), method="REML") ### set up forest plot (with 2x2 table counts added; rows argument is used ### to specify exactly in which rows the outcomes will be plotted) forest(res, xlim=c(-16, 6), at=log(c(.05, .25, 1, 4)), atransf=exp, ilab=cbind(dat.bcg$tpos, dat.bcg$tneg, dat.bcg$cpos, dat.bcg$cneg), ilab.xpos=c(-9.5,-8,-6,-4.5), cex=.75, ylim=c(-1, 27), order=order(dat.bcg$alloc), rows=c(3:4,9:15,20:23), xlab="Relative Risk", mlab="RE Model for All Studies", psize=1) ### set font expansion factor (as in forest() above) and use bold italic ### font and save original settings in object 'op' op <- par(cex=.75, font=4) ### add text for the subgroups text(-16, c(24,16,5), pos=4, c("Systematic Allocation", "Random Allocation", "Alternate Allocation")) ### switch to bold font par(font=2) ### add column headings to the plot text(c(-9.5,-8,-6,-4.5), 26, c("TB+","TB-","TB+","TB-")) text(c(-8.75,-5.25), 27, c("Vaccinated","Control")) text(-16, 26,"Author(s) and Year", pos=4) text(6, 26,"Relative Risk [95% CI]", pos=2) ### set par back to the original settings par(op) ### fit random-effects model in the three subgroups res.s <- rma(ai=tpos, bi=tneg, ci=cpos, di=cneg, data=dat.bcg, measure="RR", subset=(alloc=="systematic"), method="REML") res.r <- rma(ai=tpos, bi=tneg, ci=cpos, di=cneg, data=dat.bcg, measure="RR", subset=(alloc=="random"), method="REML") res.a <- rma(ai=tpos, bi=tneg, ci=cpos, di=cneg, data=dat.bcg, measure="RR", subset=(alloc=="alternate"), method="REML") ### add summary polygons for the three subgroups addpoly(res.s, row=18.5, cex=.75, atransf=exp, mlab="RE Model for Subgroup") addpoly(res.r, row= 7.5, cex=.75, atransf=exp, mlab="RE Model for Subgroup") addpoly(res.a, row= 1.5, cex=.75, atransf=exp, mlab="RE Model for Subgroup") |
这段代码给出了以下组合森林图:
所以我的问题是如何在图的最底部去除总相对风险及其相应的结果?换句话说,我只想绘制一些森林图并在同一个图上显示它们,但不想将它们组合并显示结果。
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